rs51119365 SNP Detail

Summary

• ID
  rs51119365
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:148217822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGCTAAAAA TAGCTTCTGA AAGAGAAACC GCCCAAGCCA
  CCGACCACAC TGGTACAACA GAGGCACTAT GAGACCCTGA ACGGACATCA CAAAAGCCAG
  S
  GGGCAACCAG TCCAATTGGA TGAACTATCC AGCCAAGTCT CCTGTTTCAG TCTCACCGGC
  AGAAGAGGAA GTGATACTTC ACAGGCCATG TTCCTCGCT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320555347	CHEV_2_148201638	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51119365					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:148217822 () rs orientation: forward

Symbol	Name	Function Class
Gm39957	predicted gene, 39957	428 bp downstream
Rr566886	regulatory region 566886	1660 bp distal
Rr566887	regulatory region 566887	within coordinates
Rr566888	regulatory region 566888	371 bp distal
Rr566889	regulatory region 566889	within coordinates