rs51117638 SNP Detail

Summary

• ID
  rs51117638
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121292648 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTGAAACCT ACAACCTGCC CATGATTTAA ACATGTTTTT
  GTATCTCTTG TCGCATCTAC ACGTGGACTT TCAGTTCATC CGTTCATTTG CCTTTAGACG
  Y
  TCGCCCTAGA GTTCACACAG CGAGGGAAAG GCTGAAGATA ATAAATGTTC AGCAAAACAG
  ATTCCGCTGG CTTGTCTCCA TTCCTTCCTC TCTAAGTTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135722413	ENSMUSSNP2872261	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51117638					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121292648 () rs orientation: forward

Symbol	Name	Function Class
Rr584095	regulatory region 584095	1142 bp proximal
Rr584096	regulatory region 584096	1428 bp proximal
Slc44a3	solute carrier family 44, member 3	Intron