rs51098307 SNP Detail

Summary

• ID
  rs51098307
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131508917 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACAATTCA TAAGTCTTAA
  ACTGCATGCA GTTTTGAGCA GCATGATAAA ATCTCGCATT GGCCTTCTCC ATCCTGCCCA
  GGATGTGAAT CACCCTGCCT GTTATTCACT CGGTCACCAT GCCACTTATC AGATGGGCTA
  TTCTGGTATC ATGATGTTTG TGCTTTTTAA AGTCATGAAG GCCTGAGAAC ACTGCTGCCA
  S
  AACTCTTATC TCGGTACACG GTTATATTGT TCTATTTTTA TCATTGGTTA TCATTAACCT
  TTTACTGTGC TCCATTCATA AATTAAACTT TATCTTAGGG ACTCTGTAAG GAAAAGACTG
  TTAGATTTTA TAGATTCCAC AATGTCTTGT AATGAATATA TATCCCTTGT GGGTGTATGG
  GGCTACTGTA AACAATTTTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss135905475	ENSMUSSNP2035276	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51098307					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131508917 () rs orientation: forward

Symbol	Name	Function Class
Rr375748	regulatory region 375748	651 bp downstream
Rr585381	regulatory region 585381	within coordinates