rs51089517 SNP Detail

Summary

• ID
  rs51089517
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:174334674 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAGGTTGC TGAAAGAAGT
  TGGGGATAGT TGGGAACTCT GTCCAGGTGA CACAGGGTTC ACAATATCAG AAAACAAGTT
  TGGATGATTT TGTGGCAGGG TCTCTCTCAC TCCCTCAGAA GGGTTAAGAG GGTGAGGACT
  CTATTGACCA TCTTTGATTC ATTCCTTTCA TTGGTGTAGA CTGAATGTTT GGTGGGAAAC
  A
  TGGGAAACCG TTCTTTCAGA TGTTGAATGG TGTTGAGTGC CATGTGACAG GGTTGAAGTG
  TCACCACACA GCCCTTGAGG ACCCAGTCAA CAGTGGGCAG AGGTCCTTCA CAGGGAAGCC
  AGTTGGTGAT GTTTCAGGGC ATTCATGAGA TGGTGTTCAA GCAGTTTCAT TTGGACTTTA
  GTCAGTAGGG GGTGCCCTGA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148344152	ENSMUSSNP328957	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51089517					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:174334674 () rs orientation: forward

Symbol	Name	Function Class
Rr572141	regulatory region 572141	75 bp proximal
Rr572142	regulatory region 572142	178 bp proximal