rs51076853 SNP Detail

Summary

• ID
  rs51076853
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:75463893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGTAG AGACCTCGCT GACGCCCACA
  G
  GGCCCGGCTC CCCACCCGTC CGCCC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135328683	ENSMUSSNP3590974	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51076853					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:75463893 () rs orientation: forward

Symbol	Name	Function Class
Pdcd10	programmed cell death 10	Intron
Rr578348	regulatory region 578348	within coordinates
Rr578349	regulatory region 578349	215 bp proximal
Rr578350	regulatory region 578350	251 bp proximal
Rr578351	regulatory region 578351	972 bp proximal
Serpini1	serine (or cysteine) peptidase inhibitor, clade I, member 1	907 bp upstream
Tssr29563	transcription start site region 29563	924 bp upstream
Tssr29564	transcription start site region 29564	944 bp upstream
Tssr29565	transcription start site region 29565	990 bp upstream
Tssr29566	transcription start site region 29566	1008 bp upstream
Tssr33586	transcription start site region 33586	203 bp downstream
Tssr33587	transcription start site region 33587	317 bp downstream
Tssr33588	transcription start site region 33588	338 bp downstream