rs51075433 SNP Detail

Summary

• ID
  rs51075433
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:30659389 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGAAGGAGAG AGAAATCTCG
  TGCCTTCGGA GCCTGCATGG AGGTCAGCCA CCTCCAAGGA CCCACACAGT GGCGATGAGA
  AAGAATGGAA AAGAGAAAGG ACCAGGGAAA TGGCAGTGCC AAGGCTCTAG CCATCGTCTA
  AAAGAAAGAT ACGGGAGAGA AGAAAGAGGA AGTCATACCT CAGTCAGGAC TCAGAGTGGC
  Y
  GGCAAACCCA ACCGAACCTC ATGGTGGCAC TGTAGCAACC ACTTGGTTGA TTGTTGGTTT
  GTTTTGGAGG AGGATTGCTT CTGGCCTTGT CTGGCTGGAA GCTGGCTATG TAGGTGAGGA
  TAGCCTTAAA TTCTCCATGC CCCTGCTTCT CTGCCTCCCA AGTGCTGGGA GACAGACAAC
  ACCCTCCAGT TCCTGTTGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146399231	ENSMUSSNP6189355	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51075433					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:30659389 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11452	CpG island 11452	1768 bp proximal
Rr554427	regulatory region 554427	within coordinates
Rr554428	regulatory region 554428	13 bp proximal
Rr554429	regulatory region 554429	1573 bp proximal