rs51062183 SNP Detail

Summary

• ID
  rs51062183
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:150685385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGTGGGCA TGACCTGGCA
  TGTTCACTCA TGAATGGTGA CTTTTCAGAG TGGCTGATTC AAGTGACCCC TTCTAGTCCA
  GCATCCTGCA GCAAACAGCA TGCTCCTTTG GGCCATCGTC ACTCACCTTG TACAGCTCCA
  CACGGTGGTC ACCTCCTCTG CAGCATAAAA AGGAGAGAAA CAGTAACAAC TGTTAGTGCC
  C
  CTGTTCAAGG TAGGGACAAG ATAACCCTCA AGAGTCTGGG ATCCCAGAGC TGGAGGGATG
  GTTCAGTAGT TAAGAATGCT TACTGTTCTT TCAGAGGGTC TGGGCTGAAT TCCCAATACC
  CCCACCAGGC GGCTTACACC TGTTTGTAAC GATACTTCCA AAGGATCTGA TGCCCTCTGA
  CATGTGTGGG CACCTGCATA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss147951619	ENSMUSSNP319261	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51062183					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:150685385 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Abhd12	abhydrolase domain containing 12			Intron
				Noncoding-Transcript-Variant
Rr567117	regulatory region 567117			916 bp distal
Rr567118	regulatory region 567118			1356 bp proximal
Tssr26717	transcription start site region 26717			1078 bp upstream
Tssr26718	transcription start site region 26718			1056 bp upstream