rs51056681 SNP Detail

Summary

• ID
  rs51056681
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:103236062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTA GACTCGGTGA GAACTTGTCT
  Y
  AAGCATTTAG AGTGACGAGG AAGAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss136877213	ENSMUSSNP6989854	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss323160968	CHEV_9_103261193	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs51056681					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103236062 () rs orientation: forward

Symbol	Name	Function Class
Cdv3	carnitine deficiency-associated gene expressed in ventricle 3	Intron
D9Mgc22	DNA segment, Chr 9, MRC UK Mouse Genome Centre 22	1460 bp distal
Rr685916	regulatory region 685916	621 bp distal
Tssr91192	transcription start site region 91192	239 bp upstream