rs51050851 SNP Detail

Summary

• ID
  rs51050851
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100822622 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTAGCAG ACTTGTGCAG
  CCTCCGGAAT TGCACCTTTT AATCAGGACT GCTTTAGCTG CTTAGATCTC TTGTACTTCC
  ACAAGTTTTA GGATTAAATG TTTTCTTTAT GTGAAGAATG TCATTGGAGT TTTTATGAGT
  GTTACATTGA CTATATTGCT TTTGGTAAGG CAGCCATCTT AACACTATCG ATTCTGCCAA
  M
  CTGTGAGTAT GGGAGGTCTC TCAATTAGTC TTTGCCCATA TTGACATGCC ATCCTGACAA
  GGAGCAAGCC ATGAAACTAA CCAGGGCAAA AGTGGACCAC ACCAAAGGTC CAATTTAAAA
  CAACATTTTC ACCGGGCATG GTGGCACACG TCTTTAATCC CAGCACTTGG GAGGAAGAGG
  CAGATGGATT TCTGAGTTCG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss135542842	ENSMUSSNP1604930	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
ss320850227	CHEV_3_100719229	CHEVERUD	SCREENING_POP	f	SNP			A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs51050851					SNP	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100822622 () rs orientation: forward

Symbol	Name	Function Class
Gm40108	predicted gene, 40108	86 bp downstream
Rr581925	regulatory region 581925	1537 bp proximal
Rr581926	regulatory region 581926	1631 bp proximal