rs51048740 SNP Detail

Summary

• ID
  rs51048740
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:29122638 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTAGTCAA AAAGTAAGGC
  CAGCTGGGTC ATCTCTGGTT TGTAAACATA TCAAACCAGC TCTATATTTG GGGCACTCAG
  GTTGCTAACA CAATCACCAT GATGGGATTT TGTTATGGGA AGATACAAAG AAATATGCAC
  ATAAAAGACA CCCAAACAAG TCCATTTGTC TAAAAGACAT TCTGTGCTTC TCTGAATCTG
  M
  ACCTATTCAT CACACAGGAG AGAGCTCTTC CAAGGAGAGA AACAGCCTTC TAAGATGTAA
  CCCTCTCCAC AGTGTAGAGT CCCATAAGCT TTGTGCTGCC TCTCTTATAT TACCTATCAA
  ACAACGAGGA AAGCCTTTTG CAGAGGCTGT GTAAAGAGTC CCTAGTGAGG GCTACCATGA
  AGACAAATGG TTAATGTCTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60381965	NES15888741	PERLEGEN	MM_PANEL2	f	SNP	A	C	A	A	A	C	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51048740					SNP	A	C	A	A	A	C	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60381965	NES15888741	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:29122638 () rs orientation: forward

Symbol	Name	Function Class
Rr574657	regulatory region 574657	124 bp proximal