rs51042023 SNP Detail

Summary

• ID
  rs51042023
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127764785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTCCAGC CCTAGTTTCC
  TATTTTTAAG CAGGTTTGCA CCTCTGAAAA TTTTGGTGCA GAGTTGTTCT TATGGGGTCT
  CCATTACCTA CCTGGCTGTT TTCTCTTCTC TGGTGTTCGC TGGGCTGTAC AACCATTATC
  GGCCACTGGG TGGCGCTGAA GCGCCAGGCA AATTATTTGC TGTGGTCAGG CCATCATTTT
  R
  ACTTTTAGCC AACACTAAAT GTTACAGGGA AAGGTTACTG ACTTCTGCAG TCTTTGAGAT
  ACAATATTTT ATTATCTGTC CATTTCCCTT GAGTTTTTAC TTGACAAAGT CTGAAGGCAT
  TTTCTTTTTG GTTTTAGATT AGAGATATTA ATTTATTTGT ACATTTTTGT GACAAGTGGA
  GTGTTGAAAA AAAAAAAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320958802	CHEV_3_127674054	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51042023					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127764785 () rs orientation: forward

Symbol	Name	Function Class
Gm35667	predicted gene, 35667	within coordinates
Rr52	regulatory region 52	within coordinates
Rr584913	regulatory region 584913	within coordinates
Rr584914	regulatory region 584914	41 bp distal