rs51038383 SNP Detail

Summary

• ID
  rs51038383
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:152776202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGACAGACT CTTGACTAGC
  TACTAGTCAG GTAATGGGGA GAGTGTTGGG GGGGGGGTGC AGGGCTGTAA TGGAAAAAGA
  GTGAGACCAA ATCCACCCTG AACAAACTAA CGCATATCCA AAGTGGACCT GGCATTTGAC
  ACTGAGCAGG ATAAATTGTC TGCATAGTGT TTGATATAAG AGGGGGAGGG AGAGAGCAAC
  R
  GTGCTGTGTC AGCACATGGA ACGCAAGTGC AGTCGAATGG GGCCTCAGAG GGTCTGGAAA
  GAGCCCCAGC CACGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAACA
  GCCATAGTTG TCCAAGTGGA TAAAACTGCA CAAGGAAGAA AAAAGGAAGG GAGGGAGAGG
  CTGGGAGTGG GAGAGAACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136106004	ENSMUSSNP5547199	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss321029722	CHEV_3_152733529	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51038383					SNP	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152776202 () rs orientation: forward

Symbol	Name	Function Class
Gm16213	predicted gene 16213	within coordinates
Gm40182	predicted gene, 40182	within coordinates
Rr587647	regulatory region 587647	569 bp proximal
Rr587648	regulatory region 587648	1736 bp proximal