rs51030330 SNP Detail

Summary

• ID
  rs51030330
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:31937123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTCATGAA GCAGAACCAA
  GTAAAACCCA TTAGCAGCTC CATTTGTGCG TGCGTGTGGG TTATAAAGCA GGGGGAATTC
  ATGCATACAC AAAGAGACAG GTGTTCTAGT CGTCACCAGA AGTGGGCCTC TCAGCAGGAA
  GTCTCCACTG TGTCTGCTGT TATGGAGAGC AACTGAGGTC ATGAATCTGT TCATCTCTTT
  R
  GACGTGATTT AGTTAACATA TACTACGCAT GTTCTCTTCG CCAGACACAG TTCTGAACAC
  CCAGCACACA GGACAAAAGA AGCCCTCTTC CATGCTTGAG CAGTGAGGTC AGAGAGATTC
  TTGGAGTGGC AGGGTGAGCA GCGTTCCCTA AATGAGGATT CCTAAATGAA CTGAGTGCAT
  GTGGTCATAG GAGCAAAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60384307	NES15886333	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51030330					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60384307	NES15886333	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:31937123 () rs orientation: forward

Symbol	Name	Function Class
Rr574924	regulatory region 574924	within coordinates