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rs51025657 SNP Detail
Summary
  • ID
    rs51025657
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr3:131592139 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          TCTTAAACCA TTTGAAAAAT CAGAACACTT TTTATCGTCT
    TGCTGAGAAC TCAGGCTTGG TTTTTAGCAC ATAGTAAGTG GCTCACAGCT GCCTGTAATG
    Y
    TAGTTCTAGG AAATCTGATA CTCTCTTCTG GCCTCTTCAG GCATTGCATA TGTGTGATGC
    ATGTATACAC TTAGGCACAC ACATACACCT GCACGCACA                       
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
DBA/2J
ss135905997 ENSMUSSNP1328263 ENSEMBL ENSEMBL_Sanger f SNP T C
SNP Consensus Information
SNP Consensus Type
A/J
DBA/2J
rs51025657 SNP T C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:131592139 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm65547 predicted gene, 65547 1531 bp downstream
Rr585388 regulatory region 585388 206 bp proximal
Rr585389 regulatory region 585389 283 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory