rs51015831 SNP Detail

Summary

• ID
  rs51015831
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:69333633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAGAGCTGG CCTTGGTGGT TTGGGCTCAG GAGAGCTGGC
  AGACTGACCC ACACTCAGCT ACCAGCCAGG CCCAGATCCA GGGCTCTGTG CTGGCTCACC
  Y
  CAGCATCTAC TCCATCTGTG AACTGCTGGA GGGTATGAAG GGGCTGTAGA TCTGCAGAGT
  CTCTATGATA CAGGGCAACA ACACTGTAGT GAGAGGAGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss132355949	ENSMUSSNP6325907	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss323729549	CHEV_11_69256309	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51015831					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69333633 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnah2	dynein, axonemal, heavy chain 2			Intron
				Noncoding-Transcript-Variant
Dnah2os	dynein, axonemal, heavy chain 2, opposite strand			623 bp upstream
Rr449991	regulatory region 449991			458 bp proximal
Rr449992	regulatory region 449992			634 bp proximal
Tssr102474	transcription start site region 102474			836 bp upstream