rs51015630 SNP Detail

Summary

• ID
  rs51015630
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:51905071 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGCCATTC CATCCCAACA
  CATAGAAACC CTGTGGCCGC TCACTCCAAC AGCCTACCAG CCAAGGTGAC ATAACAGACC
  TGTGTCCTGC ATACACGGTG GTCTCCGCAC TCCCTTCTGA GTCACCCAGC CCTGAGCTTG
  ATAGTGACTT CACTTGCTCC AGAGGCCTCA GCATGTGCAT CTGCTCCTCC TGCTGAGCCG
  Y
  GCACCTCTTT AGAACACAGC ATAGGGTACT GATTCGGGGG GTGGAGTACT GTCACTGTCA
  CTGCTTGCTG TGCCCTATGT GTGCACTTCC TATCCCCTCA CGGTGTCTCC TGAATGCAGG
  CGGCCAGGCA GATTGTGTCC AAAGGGCCAC TTCTGTGATT GTAACACACA CACACAAACA
  CAGGAGCCGC CTTGATATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60411397	NES15908746	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51015630					SNP	C	C	C	C	C	C	C	C	C	C	T	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60411397	NES15908746	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51905071 () rs orientation: forward

Symbol	Name	Function Class
Maml3	mastermind like transcriptional coactivator 3	Intron
Rr576433	regulatory region 576433	912 bp proximal