rs50992911 SNP Detail

Summary

• ID
  rs50992911
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:69901987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATACACCTT GTAAGTTAGT GGGAGACCAG AACAGGAAAA
  ATGGACCTTG TAGGCTAAGG GTTCTGTTTG CAGGTAAGAC AATTAAGAGT AAGTGGATAC
  M
  GAAAATGTGG TACGTTTCCA CAATGGAAAT TAAAAACAAT GACTTCATGA AATCTGCAGG
  CAAATGGATG GAATTTGAAA ATATTATCCT GAGTGAGGT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss135273495	ENSMUSSNP6016924	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320794090	CHEV_3_69798576	CHEVERUD	SCREENING_POP	f	SNP		C	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs50992911					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69901987 () rs orientation: forward

Symbol	Name	Function Class
Rr578250	regulatory region 578250	510 bp distal