rs50972331 SNP Detail

Summary

• ID
  rs50972331
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153419795 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTGATGAGG TCTGAGCTGA AGGGGTGTGA GGTGGGCATG
  GATATGGGTC ACTGGGTGAA GCTTTGGGGG TATGTTCTGT CACCAGCCCC TACCCCATCT
  G
  TGACTCTGCA CCTCACTGAC CAAACTGAAG TGGAAACTTG AGGGTTTTTT GGAGAGTCGG
  TTGGATGGTG TTTGGGGGGT GGGGGTGGGG GGCAAACAT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147997138	ENSMUSSNP3527625	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50972331					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153419795 () rs orientation: forward

Symbol	Name	Function Class
Rr567686	regulatory region 567686	1382 bp distal
Rr567687	regulatory region 567687	311 bp distal
Rr567688	regulatory region 567688	149 bp distal