rs50964959 SNP Detail

Summary

• ID
  rs50964959
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:90060473 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGTCTGAT GTTATCCAAC
  AATTATTTGA CTGTGGCATT TAAAACAACC TAGTCTTTGA ACAATGGTTT GCTTGTTTAT
  TTTAGAAACC TGGTCTCAGT CTGTTACCCT GGTAGATTAG CACTCACTGG TAGCCTCGGC
  TGGCATTGAA CTGCAGTAAA TCTCCTGACT CTGCAATCTG AGTGCTGGGA TTGGAGGTAA
  K
  AACCAGAACA TTCATCTTCG TCTTCATGTA TTTAATAACC CTCTTTAGCC AGTCTCCAGC
  TCCTGCAACA ATGAATACAA GCATCTTGTC AATTTTACCC AGTGTTCCAT TACTAACTCT
  AACCCCAGTA CCTGACACAC ATAGGAAGCA GACATTTGTT AAATGGTAGA CACTTTTGTT
  AAATAATTGA CCCATTGAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146955482	ENSMUSSNP5528014	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
ss321206785	CHEV_4_89838927	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50964959					SNP	T	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:90060473 () rs orientation: forward

Symbol	Name	Function Class
Rr595232	regulatory region 595232	1020 bp distal
Rr595233	regulatory region 595233	1155 bp distal