rs50954060 SNP Detail

Summary

• ID
  rs50954060
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60704409 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCACAGGAT CCATAAGAGT
  AAAGCGCTCT ACACTGAAGA CACATGGAAA CATCTTTGAG ACTGAGAGGA GTCACACTTT
  TAGAGATCCC ATGAAGTCTT ACTAGAGGCC ATGATCGCAG CCCACTGACC AACCTGAAGA
  GAAGACAGTA TTGAACCCTA AACTGACAGG GTGCTTAGGA TTTGAAGGTT AATCACATCG
  Y
  AGTTTAGAGA GAGGCACCTT GTGAAAGCTT GATTATCCAT TTAAAAACAC GATAAAATCC
  AGCCAGAAAA TGTATCACTA AGTTGGGAAA TTTACAGTTT AAGTGACATG AAGTGACAGA
  GGAAAGACAA ACAGATTGAG AAGAGATTAA GAAAATAAAA CTGGTAAACA TATGCTTGGT
  TTGAGTAGAA GAAGAGACGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135220997	ENSMUSSNP1583985	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50954060					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60704409 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577459	regulatory region 577459	838 bp proximal