rs50953334 SNP Detail

Summary

• ID
  rs50953334
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:159284374 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGAGATTC TGGCCTGTGC
  CAGCAGAAGT GTTTTTTTTT TTTTTTTTTT CTTCCCAGTC TTAGAAAACA GAAAGTTCTT
  ATGTAGGGAA ATGTGGTTTA TGACCATCCT GCTATCCTGA CTTCAGTTGG TTTGCTCTTC
  TTCTGTGTTG GATTCCTAAC TTCCCATATA TCTGCAAGAT GTTTGGAGTC ACCTTCTCAA
  G
  GGTAGTAGTC AGAGTCCTGA GCCCTTACAT CTACTGAGGA ATGAAAAGCA GGCCTGTGCT
  CCTGTGGCTC TAACCAACAG GCTACACATC CTCTGTTGAG AGTGTGTAGA AGAATGCCTG
  TGTCCTGTGG CAGCATGGCA CATCTCCATG CTGGTGTCCT CCACAAATGA CAGTTTGGGA
  TGCCCTGACA CTGCTTGGAA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148132374	ENSMUSSNP3973845	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50953334					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:159284374 () rs orientation: forward

Symbol	Name	Function Class
Rr568916	regulatory region 568916	1205 bp proximal
Rr568917	regulatory region 568917	1296 bp proximal