rs50938320 SNP Detail

Summary

• ID
  rs50938320
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:128339441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAAGTCCA ACTTGTGCTG
  CCTGATGCAT TCATGGATGT GTGGCCTTCT ACTAGTATAT AATCAACCTA CCATGGGCCT
  GTCCTCTTAG GGAACACCCA CTATCTCTTT CCCAGTGGCT ATCAATGGAT AATAGCTTCT
  CAGATGGAAT TCCACGCCTC CCCTCTGAAT GCTGGTAGAC AGTCTAGGTT TTAATTAAGA
  S
  ATGTGAGTCA CACCCCTTCT TCTAAAGGCT CAGGGATCAT TGCTAAAGAG GGGTTGGAAA
  GACAGTAAGA GCCAGAGGTG GTGGATGGCT TACTATAAGG TTACAGTGTC TTTGGACACA
  GCAGGGTAAT GACACACAGG AACTCACAGC AGCTATGAGA GGATATCCAA ACCCTGTGTA
  AGCTGCACTC ATGAGGTTAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss135883787	ENSMUSSNP3504801	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs50938320					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:128339441 () rs orientation: forward

Symbol	Name	Function Class
Rr497	regulatory region 497	within coordinates
Rr584942	regulatory region 584942	422 bp proximal