rs50937195 SNP Detail

Summary

• ID
  rs50937195
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119495614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT TTAATAGTTT AATGTATTTT
  T
  ATAGCAAACT TACAGGAACA GCACA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147338618	ENSMUSSNP2911844	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50937195					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119495614 () rs orientation: forward

Symbol	Name	Function Class
Gm75025	predicted gene, 75025	within coordinates
Gm75032	predicted gene, 75032	within coordinates
H3f3c	H3 histone, family 3C	mRNA-UTR
Rr563558	regulatory region 563558	1822 bp distal
Rr563559	regulatory region 563559	799 bp proximal
Tssr25826	transcription start site region 25826	1017 bp downstream