rs50936077 SNP Detail

Summary

• ID
  rs50936077
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:9115548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGTGCCAC CGGCTGAGGG
  ACAGGCTCCA GTGACCCTTT CCAGGTTCCA GCATCTGATA GTATCTAGCT CTAGTAGGAC
  TGAATCAAGT TTCAGAGATG ACCCAGGTAA AGGGAGATAA TTTGAGTTTG TCCTCTTAAT
  CTATGTGTCC TCCTAAGGAC GGATCAGAGG AAGGCAGAAA GACTGTGGGA AAGAATACAG
  R
  GACTCTGTCA TAAGTTCCTG TCACTCAAAA CCACTCACAT GCCGCACATC ATGATGGCCT
  CATCTACAAA GTACTCATAG CCACAGGTAC GGCAGGGGAG TAAGACCTGT ACTCATGGCC
  CTCAGAGTTG TGGTAAAACC AGATTATTTC AAGGTGCTCA GGCTGGGAGT AGAACTTGCC
  TGATTTTTTC CTGCAGCTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss145985375	ENSMUSSNP3806065	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs50936077					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:9115548 () rs orientation: forward

Symbol	Name	Function Class
Gm54233	predicted gene, 54233	within coordinates
Rr588667	regulatory region 588667	307 bp proximal
Rr588668	regulatory region 588668	1553 bp proximal