rs50927365 SNP Detail

Summary

• ID
  rs50927365
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:100062379 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTATGCAA CTGAGAATGG
  CAGCCTTGAA CATCCTGCCT CTGTCTCCAA AGTGCTCTAG GAGTCTGAGT ATGTGCCATC
  ATGGCCACAG ACTAGACTAT GTTAGATGGA AACTGTAACA GGGTGATGGC ACAGGTTCAT
  TCAATCCTGT CCCTTTTTCC TCCTGAGGAT TCAACAACAC CGTATTTCCC AGTGTCCTGC
  R
  CAGTTAGTTG ATACCATATG ATAGAAGATC ATGGCCAGCG GCATGAGAGC AGCAGTTAGG
  GACAACTTTC CAGGCCTGTC ACCTCCCACA GGCCCTTCAC AATTTTCTCC TCATCTGGGA
  GGCAGTCCAG GGAAGGGGGT GAGACCCTAG AAGGTGAAAG AACTGAAAGA GAAAAGGAAG
  CTGGGTCATT GCATGTCGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss133427062	ENSMUSSNP606195	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs50927365					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:100062379 () rs orientation: forward

Symbol	Name	Function Class
Rr635572	regulatory region 635572	442 bp proximal
Rr635573	regulatory region 635573	1427 bp proximal