rs50905249 SNP Detail

Summary

• ID
  rs50905249
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:92268978 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTTTAATC CAATGCTCAC
  AGTCATACAC ATAAGACTGC AATGTACAGT CATGTATAGC ACATTCCTAG GCACACAGAT
  ATACATTCAC AATTACAAAA GTACATCCAC AGTATGCACT TCTGAAAAAC GCAAACCTAC
  AAATTTGTAC TTAAGCAGGC AACTACATAT ATCTACATAT CTTAGTGCTA TCTCAAACAC
  Y
  CTAATATTTA CTGTACTCAG TGCATACACA TTTATAATCA TATACACATT CACACAATCA
  CCAGAAAAAC ATACACCTAG ACAGAAACAC ACACACACAC ACACACACAC ACACACACAC
  ACACACATAC ACTGGCCTTT TCTGTCACAT ACACACATGT TCACAAACAT GCATTTACAT
  GCAAATGTGC ATTCATAAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324479874	CHEV_13_92902425	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs50905249					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:92268978 () rs orientation: forward

Symbol	Name	Function Class
Rasgrf2	RAS protein-specific guanine nucleotide-releasing factor 2	814 bp upstream
Rr483653	regulatory region 483653	324 bp distal
Tssr4138	transcription start site region 4138	909 bp upstream
Tssr123423	transcription start site region 123423	790 bp upstream
Tssr123424	transcription start site region 123424	661 bp upstream
Tssr123425	transcription start site region 123425	633 bp upstream
Tssr123426	transcription start site region 123426	604 bp upstream
Tssr123427	transcription start site region 123427	584 bp upstream