rs50903766 SNP Detail

Summary

• ID
  rs50903766
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:136599422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAACAATA GACAGAAAGT
  ACCAAGGAGT ACAGTGCCTC CCCCAAATAC TTTCTGGACA GTCGCTGGCT GGCAAATAGC
  ACTGACAGTT AAATAAAATC TAACCTATTA GAATCAAGGC AACTCCACGT CAATCCATAA
  TGTCCTTAGA CACTTCTCAT TCTCCTGTGT AGCATTGTTT CCTGATGCTG ATAGCTGCTT
  S
  TCACATGCTG GCTATGTCGC CTCTTTGTGC GTAGTTCCGA TGTGACAAGC CAGAGACTCG
  GGCACAGAAG GGGGGGTACT CCGCAGTCTT TGAGACTTCT CTGGATCTTT AGCTCTGATC
  TCTTGCTGTG GGTAAGCCAC GGTCCTTCAG GAAGAGGGTA GAACTGTTTT CATTCAGGGA
  ACCTTTTCAT CAAGCAGAAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss135937495	ENSMUSSNP4760370	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50903766					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136599422 () rs orientation: forward

Symbol	Name	Function Class
Ppp3ca	protein phosphatase 3, catalytic subunit, alpha isoform	Intron
Rr585894	regulatory region 585894	within coordinates