rs50898908 SNP Detail

Summary

• ID
  rs50898908
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:7559636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAGAACCA ACTTTGGTTT
  ACTTTAAAAT TTTATTGAGA GAGTGATATA TATGAGGATT TAGAGAGAGG AAAGGGAAGG
  GAGAACTGTT TTAATTATAT TATAATCTTA AAAAGTAGTA GAAAATCATT GAATTAAGTA
  AATTTTTCAA GTAATTGAGA CTCTATTCAT TTTCTGTAGC ACGATTTGAA GAATCGAGTT
  Y
  TATGATGTTT TCTAAATAAC AAATCAAAAA GTGTACATAT CAGAAAGTAC ATAAGAAAGA
  TAATGATATT GCATTACATA TTAGGATATT TGCAGGTAAA CTTATTTACA TTTCACAACA
  TAGAACTTAA AGCAGGAGCA TTCAAAACAA AAATAATTAC CTAAAATTAA TCCTCACAGC
  TACAACATTA CCAATGAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134557405	ENSMUSSNP4274779	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50898908					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7559636 () rs orientation: forward

Symbol	Name	Function Class
Gm66025	predicted gene, 66025	within coordinates
Rr573246	regulatory region 573246	1903 bp distal
Rr573247	regulatory region 573247	1660 bp proximal