rs50868908 SNP Detail

Summary

• ID
  rs50868908
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137132242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATTTGTTT TGCTTCATTG
  GTGAGTTGGT CTTACTATGT AGCCCTAGCT AGCCTATGTT GACTGAGCTA GCCTGTAACC
  CACAGAGATC CACCTGCTTC AGCCTCCCTG TGCTGAGATA AAAGGTGCAT GTTACTACAT
  GTCTTTTCCA AAATCCATTC TTAAAGTGGA CCAGCCCCGG GCATCCTCAC AGACACTTTA
  Y
  CCCTGCTGAC CTTGTCATTT ATGGTCCCCT TGACACCTCT ATGTCATCTG GAAGGACCAG
  GGTCACAGTT GCCCCCTACC CTAGTGCTGC CCAATGAAAT GGTCTAGGCT GATGTCTGAC
  AGCTCCCTGG AGAAAGATGT TGTTGCCTAT GTACCACACT GTAGGTACCA TTATTTTCTA
  CCTCAACTAT CTAGCTACCG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147604821	ENSMUSSNP191097	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50868908					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137132242 () rs orientation: forward

Symbol	Name	Function Class
Cela3a	chymotrypsin-like elastase family, member 3A	Intron
Rr602614	regulatory region 602614	1566 bp proximal