rs50847716 SNP Detail

Summary

• ID
  rs50847716
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117668277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAATAATTC CCCACTGTGG AAGAGCCTTA ACTTATCTCC
  TCTGACATCC AGCTCCAATG AATTATCTTC ACTTTGATGG CTTCAGCCAG TCCCCCTTCT
  K
  CCAAGTCCTC AAACTGATAA CCAACCTAAA TTCTGGATGC TTCCATAAGA GGGCACTACA
  ATCTCACTTC TAAAAGAAGT AGGATCCTAA ATGGCTTTT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147294253	ENSMUSSNP1277700	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50847716					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117668277 () rs orientation: forward

Symbol	Name	Function Class
Gm68791	predicted gene, 68791	1763 bp downstream
Rr598215	regulatory region 598215	1260 bp distal
Rr598216	regulatory region 598216	39 bp proximal
Rr598217	regulatory region 598217	391 bp proximal
Rr598218	regulatory region 598218	1816 bp proximal