rs50832270 SNP Detail

Summary

• ID
  rs50832270
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:120527060 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCACCCTC CCAAGAGGGA
  CCACTGACAA GCTGGTCAGC AGACAGATGG GCAGAGAAGA TAAGACTAGA ACAGCTCACC
  AGGCCCTGGC CCGATAGCTG CAGGTGAAAA AGAAATGAAC TCAGAGTCTC TTTACCACAT
  AACCAGTTCT AGAACATTCT CAGGAGCTGC CTGACCTCAG ACAAAGTCCC CTGACCGATG
  R
  TTCTTAGCAC GTGACTTCCT GTGGTGTCTT TCACCTCGTC CTGAGAGCCG GCCTCTTAAA
  GCAGCCTGCT GCCCTTCTGT CCTGAGGACC TCAGTCTCCT GCCTGGGCAG TGTCTGCTGA
  GATCTTTAAA TTCAGTCTCC CTAGAGACTG GGAACTCAGT TGGGGCACAG ACAAAGCATG
  CCTTATCATC ATCATCATCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147346050	ENSMUSSNP2856810	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50832270					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:120527060 () rs orientation: forward

Symbol	Name	Function Class
Rr598841	regulatory region 598841	1111 bp distal
Rr598842	regulatory region 598842	within coordinates
Rr598843	regulatory region 598843	584 bp proximal