rs50825752 SNP Detail

Summary

• ID
  rs50825752
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:94447274 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATTAAAAT CTTTCTCTAG
  GACATAGGGA TAATCAGTTG ATCGCTCTCA AGACATAAGA ACTGAATGTA GGGCTGTAGA
  GATGGCTCAG TGGTTAAGAG CACATTCCAG AGGTCCTGAG TTCAATTCCC AGCACCCGCA
  TGGTGGCTCA CAGCCATCTG TAATAGGGAT CCGATGCCCT CTTCTGGTGT GCCTGAAGAC
  R
  GCAATAGTGT ACTGACAGAC ATGAAATAAA TAAATAAATA AATCTTAAAA AAAAAAAAAA
  AAAGAACTGA ATGTACCGTG TTGCTAGAAA CTTGATCTTA AGTAGTTGTC CTACAAAGCT
  GCAGTTATGA GTCCTGAAGT AAATTTTACA TAGCAAGGGT CTCCTAAGTG AGGGTTTCTG
  TCATGTAATA CAAAAAATTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147049658	ENSMUSSNP5913882	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50825752					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:94447274 () rs orientation: forward

Symbol	Name	Function Class
Gm10306	predicted gene 10306	1959 bp downstream
Rr595335	regulatory region 595335	1751 bp distal
Rr595336	regulatory region 595336	484 bp distal
Rr595337	regulatory region 595337	433 bp proximal