rs50819478 SNP Detail

Summary

• ID
  rs50819478
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:67394901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TAGAAAAGAC TTGGAAAGTA TCAAATTATC TGGCTTGTAG
  TTTCCTGATG GTTAGAGGTT TTTTGCTTTT CCTTTGTCTT TTTCTCTCTC TTGTGACTGT
  K
  CAATGAAAAA AAAAAAAAAC TATTGAGTAA AAATGTAACA GTTTGCTTTT TTAGATTGTT
  GGAAAACACA TTGGATGCCT CAAAATGAAA AAAAAGGCAT T                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146469612	ENSMUSSNP4085826	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50819478					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:67394901 () rs orientation: forward

Symbol	Name	Function Class
Rr593794	regulatory region 593794	449 bp proximal
Rr593795	regulatory region 593795	913 bp proximal