rs50817194 SNP Detail

Summary

• ID
  rs50817194
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:10311750 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAG GAAAAGAATT AGATATATTT
  M
  CAAAAAAAAA AAAAAAAAAA AAAAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss134580678	ENSMUSSNP2465046	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320653141	CHEV_3_10246690	CHEVERUD	SCREENING_POP	f	SNP		C	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs50817194					SNP	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10311750 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fabp12	fatty acid binding protein 12			Intron
				Noncoding-Transcript-Variant
Rr573595	regulatory region 573595			497 bp proximal