rs50815763 SNP Detail

Summary

• ID
  rs50815763
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:88325738 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CTCCTATTGA TGTCCGAAAA GGTCATCCTC TGCTACATAT
  GTGTAGCCTC CCCTCCCCCA GCCTTAAGGG TTCCACTGTT TACATCGGGG TGGAGCTTGC
  T
  GCTTAATCGT TCTGCCACAC CCACTGCTGG CTGCCGATTT GCTGTTCTGG AGCCATACAC
  GTGGTCACCC TGCTACTGGA CCCCAGGATT ATTTGTTGGG A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145578244	ENSMUSSNP4420705	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50815763					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:88325738 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Eefsec	eukaryotic elongation factor, selenocysteine-tRNA-specific			Intron
				Noncoding-Transcript-Variant
Rr633876	regulatory region 633876			1220 bp distal