rs50810943 SNP Detail

Summary

• ID
  rs50810943
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:152724739 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGCTCAAT TCATGTGGTA
  GGGGTAACAG GGTGGGGACA GATGTGCAAT CTCTGGCCAG ATGGTTCCGG GCTTTGTGAC
  AAAGCAGTCT GAGGAAGCTA TGGAGAGAGA GCAAGCCACC AAGCCATATT CCTGCATGGC
  CTCTGCTTTT AGTTCCATCT TCCTCCGGTT CCTGCCTTGA GTTCCAGCCC TGCCCTCCCT
  K
  TATGATGAAC CACAGTTACA GAATGAAGTA AACCCTTTCC TCTCTACGCT GCTTTTAGTT
  GTGCTCAGCA CAGTAACTGG AACCCTAAGG CAGGGCCGCG TGGTCCATGA TACTTGCTGA
  AAGACAGCTG TTTGTGGACA GAGCCCAGGG GATAAAGCAC TCACGTTGTG CGCAGAGGGC
  CTGAGGTCCA ATCTCAATCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136105695	ENSMUSSNP176416	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
ss321029603	CHEV_3_152682066	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50810943					SNP	G	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152724739 () rs orientation: forward

Symbol	Name	Function Class
Gm16213	predicted gene 16213	within coordinates
Rr587644	regulatory region 587644	714 bp distal