rs50810814 SNP Detail

Summary

• ID
  rs50810814
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:163551826 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTTTTTAA AATATTTATT
  TATTTATTTA TTTATTTATT ATATGTAAGT ACACTATAGT GTATCTTCAG ACACTCCAGA
  AGAGAATATC AGATTTCATT ATGCATGGTT GTGAGCCACC ATGTGGTTGC TGGGATTTGA
  ACTCAGGACC TTTGGAAAAG CAGTTGGCGT TCTTAACCAC TGAGCCAGCT CACCAGCCCC
  Y
  GTAAGGCCAT ACTTGTGTCT GGCTGTTCTG TGTACACAGC ATGTAGTCAC AAATCTGGTA
  CTCAGTGAGT GGTCGGTGAG TTTTTTGGAT GAATGGATGA CTATAAGAGA GATGATAATA
  TCTTGTTTCT TTTCACCCTC CTCAGTGTAT TTTGGGGTGA CTTTGACAGG ACTCTTAGAG
  GAGCTGGAGA AAAAACCTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148209583	ENSMUSSNP1669729	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50810814					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163551826 () rs orientation: forward

Symbol	Name	Function Class
Pkig	protein kinase inhibitor, gamma	Intron
Rr569473	regulatory region 569473	874 bp proximal