rs50793894 SNP Detail

Summary

• ID
  rs50793894
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:100062124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGTGACA TATATATATT
  ATCCTACATT GATCTAGCAT TCAGCACCCA CCATATGCCT TCAAGACACA GTGTACTGTT
  TAAGATTCTT GATTCTGAAG TCTAGTTTTG CCACTTTCAA GAGTAAGCCA GCAGCCAAGT
  GTAACTTGGT ACCATTTCTT TCCTTATTCC TATTGCTATA TCTATTGTCT TCATGATATG
  R
  AGTTGGACTT TGGTTTGTAT CAGGCTCTCT TATAGCTTTG GCTGGCCCCT ACCTTGCTAT
  GCAACTGAGA ATGGCAGCCT TGAACATCCT GCCTCTGTCT CCAAAGTGCT CTAGGAGTCT
  GAGTATGTGC CATCATGGCC ACAGACTAGA CTATGTTAGA TGGAAACTGT AACAGGGTGA
  TGGCACAGGT TCATTCAATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss133427050	ENSMUSSNP6823491	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50793894					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:100062124 () rs orientation: forward

Symbol	Name	Function Class
Rr635572	regulatory region 635572	697 bp proximal
Rr635573	regulatory region 635573	1682 bp proximal