rs50775915 SNP Detail

Summary

• ID
  rs50775915
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:81666316 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATAAATAA AGCAAAGGAA
  GCTACTTGTC CTGTTTTCTA GACCATGCTA ATCTCTCTGT GCTGCCGAGG TTTAATGCAC
  CACATGTTGT TTATATTGTT CACCATTTTT ACCCGGAACT AAATTATGAA TTACATTTTG
  TGTAAAATTT CCTCCCAGGA TCTAAAAATG AGGCTTGCAA AAATGTTTCC TTGTACGTAT
  S
  CAATATTAGT TGAATCGTGA CTACTGCCGT AATAATCAGG ATGTTCAACA CTGAACCAGC
  CAGCTGTGTG TGACTTTTGA TTTTTAATCT TTGTGGACTT CACACAGGTT ATGCAAATAC
  TCTGCCACTG CACTACAGTC CCAGCCCTGG ACTGTTTTAG AAATTGATGT CATGTGCCTT
  TAGCAAAGCA TCCTACCTTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	KK/HlJ	NZW/LacJ	PWD/PhJ
ss60421982	NES15919478	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	KK/HlJ	NZW/LacJ	PWD/PhJ
rs50775915					SNP	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60421982	NES15919478	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:81666316 () rs orientation: forward

Symbol	Name	Function Class
Rr578714	regulatory region 578714	1287 bp proximal