rs50765870 SNP Detail

Summary

• ID
  rs50765870
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131372317 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAAGCAAGC GGTCACTGGA CCCCGTTTAA TAAACACTGA
  ACAATGAATA ATATCAGAAG TGTGATTTCA ATTTACTCTT CAATCTGGTG TCAGAGCCCC
  M
  CACACGGTGT GGCTCTGGGT TGATGGAAGT GACACAGCTG TGAGGAACAG CATTGCGTTT
  ACTTATTGTG GCCGGTTAGA TCTGGCTACA CCATGGGGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147607023	ENSMUSSNP5550341	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50765870					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131372317 () rs orientation: forward

Symbol	Name	Function Class
Gm30732	predicted gene, 30732	53 bp downstream
Rr565285	regulatory region 565285	within coordinates
Rr565286	regulatory region 565286	171 bp distal
Rr565287	regulatory region 565287	248 bp proximal