rs50756165 SNP Detail

Summary

• ID
  rs50756165
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18818806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGTGGTAG AGGGTTCTTT
  ATGTGATCTA GGCTGCTCCA AACTCTCAAT CCTCCTGCAT CAAGCTTTCA ACTGCTGTGA
  TTACAGGTGT TTACTACCAT GCCCAGCTTT CTTGCCTTTG TTAAGGCTAA ATCAAGTTTT
  TCTCGTTCTC ATCCCAACTG TCACATATAT TCAAGTGTTG TGTAAGCTTG CCCCAAACCT
  Y
  CATCCAAAGC ATCTTTTCTG TCTGTCTCCT TTCAAACAAC AGGTCTTACC TTGAAATCTT
  GAGATAGAAG CTTTATCTAT CACAGTCCAG TCCTAACTTG TTCCAAATGC TGACCTTTTA
  GTAATATTCT CCAGCCCATG TATTCTAGGC TATTTTGCAG CATTTCAGAC TTCTACCTAC
  AGACTCTAAT AGCACTTTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133041752	ENSMUSSNP5583494	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50756165					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18818806 () rs orientation: forward

Symbol	Name	Function Class
Rr626951	regulatory region 626951	619 bp proximal
Rr626952	regulatory region 626952	745 bp proximal