rs50754676 SNP Detail

Summary

• ID
  rs50754676
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108730442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCATGGCT TAAACACTGA
  AAGATAGTGT TACCAGCTCT TGTATTACAT CTCAGGGTAA TGAAAGCATA TGTGTGTGTG
  TGTGTGTGTG TGTGTGTGTG TTTGTGTGTT TAGGAGAGGG ATTCAGAGAT GTAACATAGC
  TGCTAGAGTG TTTGCCTCGC ACATAGGAGA ATCTGAGTTC TATCTGTTGC ATAAGCAGGG
  Y
  TTGGTGGCAT ACTCTATAAT CCTGGCACAT GGGAAGTGGT GGCAGGAAGA CCAAGGGTTC
  AAGAATGACT TTGGCTTGCT ATATAGTGAG TCTGGGGCTA GCATGAACTA CATTAGACTG
  TATCTCAGAA AAATATACAA AAGGAGAAAG AAAGAAATAC AAAAGAAAGA AGGAAACTCA
  TTTATATGTA AGCAAATATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss133508800	ENSMUSSNP2619153	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321893998	CHEV_6_108703475	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs50754676					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108730442 () rs orientation: forward

Symbol	Name	Function Class
Rr636193	regulatory region 636193	743 bp distal
Rr636194	regulatory region 636194	424 bp proximal