rs50751571 SNP Detail

Summary

• ID
  rs50751571
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:152722219 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAGGGAGA CAGTAAGGCT
  AGAGAATGCA ATCAAAGGAA GTGAGAGAGA AAGCCGAGAT GGCAGAGGCA CAAACTTCAG
  TGCTGGAGTT TGCATGTTGC GCTTGGTGGT TTTGGTTTCC TTCTGTGTTT CTGAAAAGCT
  TTAAAGGTGA ACACGAGTGT CCATGGCTCA AACCTTTTCC TGTTTGGCCG ATTTAAATTC
  Y
  TCCCTCACTC CACTTACACA CCCATGTGAC TGAATATACA AGCGACAGCC TTGTTAGAGG
  GAGAGAGGGG AGGGTGAGGG GACGAGGGAG AGCGGGTGGC AGAGAGAGCA GAATGCCCAA
  GGCTAGCCCC TATGCATCCT CTTCACCCAC AGGAGAACTT GGCTGCTCCT AACAAAATCT
  TGAAACTCAC AGAACAATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136105611	ENSMUSSNP6545640	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss321029576	CHEV_3_152679546	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50751571					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152722219 () rs orientation: forward

Symbol	Name	Function Class
Gm16213	predicted gene 16213	within coordinates
Rr587644	regulatory region 587644	1477 bp proximal