rs50733554 SNP Detail

Summary

• ID
  rs50733554
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60704219 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACATGAAA ATAAATACAA
  AAATCATTAA TATTTTTTTC AGTTACATTT ATTGAGACTT TCTGCTCCAG TTACTCAAAG
  AAATTGTGTT TAACTAGTCC CTCATAGAGT TTACAGTGTA TTGGCAGAAA AAAATATAAA
  AAGCTGTTAG AATAAAATAC AACGATTGGT AGAGGAGTAA GAATCTGTGT CTCACAGGAT
  T
  CATAAGAGTA AAGCGCTCTA CACTGAAGAC ACATGGAAAC ATCTTTGAGA CTGAGAGGAG
  TCACACTTTT AGAGATCCCA TGAAGTCTTA CTAGAGGCCA TGATCGCAGC CCACTGACCA
  ACCTGAAGAG AAGACAGTAT TGAACCCTAA ACTGACAGGG TGCTTAGGAT TTGAAGGTTA
  ATCACATCGC AGTTTAGAGA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135220979	ENSMUSSNP6712749	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs50733554					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60704219 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577459	regulatory region 577459	1028 bp proximal