rs50712771 SNP Detail

Summary

• ID
  rs50712771
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13151158 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACTAAAAT TATTGATGGA
  TAGGCTTGGC ATCCCCTTCC CTTCAGGCCT ATATGTGGAA GCTTTTATAA CTATACAATC
  TACAGATTCA ATGCAATCCC CATCAAAATT CCAACTCAAT ACTTCATAGA GTTAGAAAGA
  GAAATTTGCA AATTCATTTG GAATAAGAAA AAACCCATGA TATCGAAAAT TATTCTCAAC
  R
  ATAAAAGAAC TTCTGGGGGA ATCATCATCC CTGACCTCAA GCTGTAATAC AGAGGAATTA
  TTAAAAATTG TATGGTATTG GTATAGAGAC AGGCAGGTAG ATCAGTGGAA TAGAACTGAA
  GACGTAGAAA TGAACCCACA CACCTATGGT CACTTGATCT TTGACAAAGG AGCTAACACT
  ATCCAGTGGA AAAAAAAGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss133003198	ENSMUSSNP596245	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50712771					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13151158 () rs orientation: forward

Symbol	Name	Function Class
Rr626556	regulatory region 626556	1041 bp proximal
Rr626557	regulatory region 626557	1286 bp proximal