rs50712244 SNP Detail

Summary

• ID
  rs50712244
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7830742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGCAGAGA AACCCCCAAA
  GATACCTACT ACAGGGCTGG ATACATGCCT TTGTAGGTAA AGTTGCTCCC TTCCAATCTA
  GATACACAGT GAAAAAAGAG AAATGACTCT TGCAAGTTGT TCTCTGACCC CCACATATAT
  GACATGACAC AAGTGAAATC AACGTAATTA AATAAATGTG ATAAAATAAA GTCATCAACT
  W
  CAGTCCCTCT TTACATCTAA AAACACAAAC TAAAAAGGAA ACACAATCCC CATGCTACGC
  ATTGAAATTT GTGAGACTAT GTCAACAACA GAACCAGTCA GTATGCACAT TACTGTTTCG
  CTTTCAAAGC AGGATTTGAA ACACACAAAG TAAGTGTCAC CTGTTCCATT TACAACAAAT
  GTATTCTGCT TCTGGTGAGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss132955741	ENSMUSSNP1502206	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50712244					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7830742 () rs orientation: forward

Symbol	Name	Function Class
Rr626323	regulatory region 626323	106 bp proximal