rs50712095 SNP Detail

Summary

• ID
  rs50712095
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:174418603 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAGCTTTC AAGCAAAAGA
  TCTCTGTGCA AATGGAGAAG ACTCTGGTGT CAAGTTCAAC ATGAGGAGAA TACTCACTTT
  TGATTAGCCT GCTGAAATAA TTTTCTCTGG GACGATGGTT CCATTTTAAA GGCACCTGCT
  TATATTCTAA CCCCTGCCCC ACTCATGTGT TGGATGTGCT ATTTCGTGCT ATTTTCTGGT
  K
  TTTGTTTTTA AAGATACAAT TTTAAATGAG GTACTGGACA TAACTAGATA GAAGGCTGAA
  CTATGCTACC TCTTAAGGAA TCATTACTCT TCCTTAACAA GGTTACCCAC CTTCTGCACC
  TTCTGTTTTT TGTTTTTTGG TTTTTGTTTT GTTTTGTTTT GTTTTGTTTT GTTTTTTAAT
  GGTGGCGCTA TTTCTTGTCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146288645	ENSMUSSNP3848675	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
ss320142598	CHEV_1_176521168	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50712095					SNP	G	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:174418603 () rs orientation: forward

Symbol	Name	Function Class
Fmn2	formin 2	Intron
Rr423776	regulatory region 423776	1563 bp proximal
Rr423777	regulatory region 423777	1824 bp proximal