rs50699891 SNP Detail

Summary

• ID
  rs50699891
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70011310 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATACCATC TGTTAAGAAT
  GGGGTAGTGT GCCCTGTGGA GCCCCCCCCC CCGTGCCCTC AGATGTATTG TGGGACAGTT
  GCCACTGCCC TTACTATGAA CAGACTTATA AACTTGGCAC ATGTGGTGAA CAGGAGGTAC
  CCCAGTGTCA GCTATGCAAG GACTTGTCCC AAGGAGTGAT GGGATTCCAC AGAGCATGTG
  W
  CATTGGGGCT GGGCCTTGAA GGATAGATAC AGGGTTCTAA GTGGGACAGG GAGGTCTCCA
  GCCAGAGTTG CAGAATTGGG TAAAGAGGCC TTAACGTTTG GCATAGGGAC TAATTCCATT
  CTGGGTCCAG CCTGAGTCTG CTCAACTCTG CAGTGGTTGA TAGCCATCAG CAAACCATGG
  GTAGTGGCCT GCTTTGCATT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139676611	ENSMUSSNP273412	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50699891					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70011310 () rs orientation: forward

Symbol	Name	Function Class
Rr494754	regulatory region 494754	168 bp proximal
Tnfrsf10b	tumor necrosis factor receptor superfamily, member 10b	Intron
Tssr126377	transcription start site region 126377	1247 bp upstream
Tssr126378	transcription start site region 126378	1296 bp upstream