rs50677014 SNP Detail

Summary

• ID
  rs50677014
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:143007754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCC TGTTTTTCTA CTAGTGAGTA
  K
  CCGCATCTGT TAGGTTATTT GACTA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321403698	CHEV_4_142871087	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs50677014					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143007754 () rs orientation: forward

Symbol	Name	Function Class
Pdpn	podoplanin	Intron
Rr604183	regulatory region 604183	1879 bp distal
Rr604184	regulatory region 604184	692 bp distal
Rr604185	regulatory region 604185	782 bp distal