rs50675524 SNP Detail

Summary

• ID
  rs50675524
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:59802459 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGGTTTTG CCTTCTCAGC
  TGGGTTACCC CCCCCTTGTT TGAGTCAGCC TTCTGTGGTT TGTTACATGT CACTCTGAAT
  GTCCTCTGAA AACCTCCTTT GTCCTCACCA GTCATCCACT TTAGAAGTGG TGGCGTTATT
  TTGAGGCAGG GTTTGGGATG CCATATAGAA TAAAGCTATG ATTGTATTAA ACGCCAGCGG
  R
  GGATAAGCAG CTAATACAAA CACCAAGCAG TGTGCCTAAG CACCTGCTGT ACCAAGGGAG
  AAGATGGGAC AATGCCTTGT CGGTACTGAG CACTCTCATG CAGTCCTGGC AGAGTTGCCA
  GTAAGGGTGA CATGGTTCTT CTTTGGCAAA ATACTAAATT GTGGGGCCTG GGGCCCTATC
  TCCTGATAGG TCCCAGGCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146403182	ENSMUSSNP1142888	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs50675524					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:59802459 () rs orientation: forward

Symbol	Name	Function Class
Rr398296	regulatory region 398296	947 bp upstream
Rr593142	regulatory region 593142	33 bp proximal